"""
FScanpy Configuration Module
"""
import os

class BaseConfig:
    """Base configuration class with virtual paths"""
    
    # Virtual data paths
    DATA_DIR = "/path/to/data"
    TRAIN_DATA = "/path/to/data/merged_train_data.csv"
    TEST_DATA = "/path/to/data/merged_test_data.csv"
    VALIDATION_DATA = "/path/to/data/merged_validation_data.csv"
    
    # Virtual model paths
    MODEL_DIR = "/path/to/models"
    BILSTM_MODEL_DIR = "/path/to/models/bilstm"
    GB_MODEL_DIR = "/path/to/models/gradient_boosting"
    
    # Virtual result paths
    RESULT_DIR = "/path/to/results"
    BILSTM_DIR = "/path/to/results/bilstm"
    GB_DIR = "/path/to/results/gradient_boosting"
    MFEGB_DIR = "/path/to/results/mfe_gb"
    
    # Virtual log paths (for minimal logging if needed)
    LOG_DIR = "/path/to/logs"
    BILSTM_LOG_DIR = "/path/to/logs/bilstm"
    MFEGB_LOG_DIR = "/path/to/logs/mfe_gb"
    
    # Virtual plot paths (not used in sanitized version)
    PLOT_DIR = "/path/to/plots"
    BILSTM_PLOT_DIR = "/path/to/plots/bilstm"
    
    @classmethod
    def create_directories(cls):
        """Create necessary directories (virtual implementation)"""
        # In actual implementation, this would create the directories
        # For publication, this is a placeholder
        directories = [
            cls.DATA_DIR, cls.MODEL_DIR, cls.RESULT_DIR, cls.LOG_DIR,
            cls.BILSTM_MODEL_DIR, cls.GB_MODEL_DIR, cls.BILSTM_DIR, 
            cls.GB_DIR, cls.MFEGB_DIR, cls.BILSTM_LOG_DIR, cls.MFEGB_LOG_DIR
        ]
        for directory in directories:
            os.makedirs(directory, exist_ok=True)